Top cofit genes for BT2044 from Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT1885		putative ATP-dependent RNA helicase (NCBI ptt file)	no	0.37
2	BT4064		NADH dehydrogenase I, chain H (NCBI ptt file)	no	0.37
3	BT4706		putative anti-sigma factor (NCBI ptt file)	no	0.36
4	BT2589		type I restriction enzyme, M subunit (NCBI ptt file)	no	0.36
5	BT1780		periplasmic beta-glucosidase precursor (NCBI ptt file)	no	0.35
6	BT3530		putative alpha-1,2-mannosidase (NCBI ptt file)	no	0.34
7	BT2542		putative haloacid dehalogenase-like hydrolase (NCBI ptt file)	0.53	0.34
8	BT4405		hypothetical protein (NCBI ptt file)	no	0.34
9	BT4343		conserved hypothetical protein (NCBI ptt file)	no	0.34
10	BT1217		two-component system response regulator (NCBI ptt file)	no	0.33
11	BT2281		hypothetical protein (NCBI ptt file)	no	0.33
12	BT2307		tetracycline resistance element mobilization regulatory protein rteC (NCBI ptt file)	no	0.33
13	BT2360		transcriptional regulator (NCBI ptt file)	no	0.33
14	BT3122		transcriptional regulator (NCBI ptt file)	no	0.33
15	BT3468		conserved hypothetical protein (NCBI ptt file)	no	0.32
16	BT0327		glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file)	no	0.32
17	BT2815		putative mutT family protein (NCBI ptt file)	no	0.32
18	BT0867		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.32
19	BT1069		conserved hypothetical protein, putative transcriptional regulator (NCBI ptt file)	no	0.31
20	BT3190		putative RNA polymerase ECF-type sigma factor (NCBI ptt file)	no	0.31

Or look for negative cofitness