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Cofit
Protein
Homologs
Top cofit genes for BT_2008 from
Bacteroides thetaiotaomicron VPI-5482
hypothetical protein (RefSeq)
SEED: Protein YicC
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BT1955
putative cell wall biogenesis protein (NCBI ptt file)
no
0.53
2
BT1439
Outer membrane binding protein for vancomycin (SusD-like)
(from data)
no
0.53
3
BT3821
5,10-methylenetetrahydrofolate reductase (NCBI ptt file)
0.33
0.51
4
BT3276
conserved hypothetical protein (NCBI ptt file)
no
0.51
5
BT0557
carbamyl phosphate synthetase (NCBI ptt file)
0.70
0.50
6
BT2386
AsnC family transcriptional regulator (NCBI ptt file)
0.80
0.50
7
BT1956
putative cell surface protein (NCBI ptt file)
no
0.50
8
BT0555
amidophosphoribosyltransferase (NCBI ptt file)
no
0.50
9
BT1957
hypothetical protein (NCBI ptt file)
no
0.50
10
BT4583
peptidase T (tripeptide aminopeptidase) (NCBI ptt file)
no
0.50
11
BT1222
6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file)
0.89
0.49
12
BT1607
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file)
no
0.49
13
BT2387
O-acetylhomoserine (thiol)-lyase (NCBI ptt file)
0.36
0.49
14
BT0556
carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file)
0.70
0.49
15
BT3933
prephenate dehydrogenase (EC 1.3.1.13)
(from data)
no
0.49
16
BT0547
aspartate aminotransferase (NCBI ptt file)
no
0.49
17
BT3727
hypothetical protein (NCBI ptt file)
no
0.48
18
BT4300
transcription regulator, CRP family (NCBI ptt file)
no
0.48
19
BT4265
GMP synthase (glutamine-hydrolyzing) (NCBI ptt file)
0.85
0.48
20
BT0350
ribulokinase (EC 2.7.1.16)
(from data)
no
0.47
Or look for
negative cofitness