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  • Top cofit genes for BT1906 from Bacteroides thetaiotaomicron VPI-5482

    transcriptional regulator (NCBI ptt file)

    Rank Hit Name Description Conserved? Cofitness  
    1 BT3469 conserved hypothetical protein (NCBI ptt file) no 0.43
    2 BT3281 hypothetical protein (NCBI ptt file) no 0.41
    3 BT2322 putative integrase (NCBI ptt file) no 0.41
    4 BT0884 outer membrane efflux protein oprM precursor (NCBI ptt file) no 0.41
    5 BT2965 hypothetical protein (NCBI ptt file) no 0.40
    6 BT2338 putative transcriptional regulator (NCBI ptt file) no 0.40
    7 BT3082 2,6-beta-D-fructofuranosidase precursor (NCBI ptt file) 0.51 0.40
    8 BT2470 hypothetical protein (NCBI ptt file) no 0.40
    9 BT3748 RNA polymerase ECF-type sigma factor (NCBI ptt file) no 0.39
    10 BT2766 hypothetical protein (NCBI ptt file) no 0.39
    11 BT4330 xanthosine permease (NCBI ptt file) no 0.39
    12 BT2966 hypothetical protein (NCBI ptt file) no 0.38
    13 BT3754 conserved hypothetical protein (NCBI ptt file) no 0.38
    14 BT3238 hypothetical protein (NCBI ptt file) no 0.38
    15 BT2647 hypothetical protein (NCBI ptt file) no 0.37
    16 BT0360 putative arabinan endo-1,5-alpha-L-arabinosidase (NCBI ptt file) no 0.37
    17 BT2467 hypothetical protein (NCBI ptt file) no 0.37
    18 BT2788 chromate transport protein (NCBI ptt file) no 0.37
    19 BT1280 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) no 0.37
    20 BT1991 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) no 0.36

    Or look for negative cofitness