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Cofit
Protein
Homologs
Top cofit genes for BT1873 from
Bacteroides thetaiotaomicron VPI-5482
endo-arabinase (NCBI ptt file)
SEED: endo-arabinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BT1872
periplasmic beta-glucosidase precursor (NCBI ptt file)
no
0.94
2
BT1874
putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
no
0.93
3
BT2856
hypothetical protein (NCBI ptt file)
no
0.93
4
BT1875
putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
no
0.93
5
BT1876
putative anti-sigma factor (NCBI ptt file)
no
0.93
6
BT3133
alpha-galactosidase (NCBI ptt file)
no
0.92
7
BT2854
periplasmic beta-glucosidase precursor (NCBI ptt file)
no
0.92
8
BT2857
hypothetical protein (NCBI ptt file)
no
0.90
9
BT1877
RNA polymerase ECF-type sigma factor (NCBI ptt file)
no
0.89
10
BT2858
putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
no
0.88
11
BT2852
putative beta-xylosidase (NCBI ptt file)
no
0.87
12
BT2855
beta-mannosidase precursor (NCBI ptt file)
no
0.85
13
BT3132
sialic acid-specific 9-O-acetylesterase (NCBI ptt file)
no
0.81
14
BT0414
sulfate adenylyltransferase subunit 2 (NCBI ptt file)
no
0.79
15
BT3046
putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
no
0.78
16
BT3047
hypothetical protein (NCBI ptt file)
no
0.78
17
BT3049
two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file)
no
0.77
18
BT2744
acetyltransferase (NCBI ptt file)
no
0.75
19
BT2853
hypothetical protein (NCBI ptt file)
no
0.75
20
BT3045
hypothetical protein (NCBI ptt file)
no
0.74
Or look for
negative cofitness