Top cofit genes for BT1793 from Bacteroides thetaiotaomicron VPI-5482

integrase protein (NCBI ptt file)
SEED: Mobile element protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	p5482_12		TraI-like protein (NCBI)	no	0.25
2	BT3385		conserved hypothetical protein (NCBI ptt file)	no	0.24
3	BT1266		putative two-component system sensor protein, no kinase domain (NCBI ptt file)	no	0.23
4	BT2955		formate acetyltransferase 2 (NCBI ptt file)	no	0.23
5	BT4687		hypothetical protein (NCBI ptt file)	no	0.23
6	BT4446		sugar phosphate isomerase/epimerase (NCBI ptt file)	no	0.22
7	BT3380		putative membrane protein (NCBI ptt file)	no	0.22
8	BT2866		putative glycosyltransferase (NCBI ptt file)	no	0.22
9	BT1682		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.22
10	BT4202		hypothetical protein (NCBI ptt file)	no	0.22
11	BT0210		leucine-rich repeat protein, function unknown (NCBI ptt file)	no	0.21
12	p5482_15		TraM-like protein (NCBI)	no	0.21
13	BT3257		putative two-component system sensor histidine kinase (NCBI ptt file)	no	0.21
14	BT1393		4-carboxymuconolactone decarboxylase (NCBI ptt file)	no	0.21
15	BT4528		conserved hypothetical protein (NCBI ptt file)	no	0.21
16	BT3639		ThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis (NCBI ptt file)	no	0.20
17	BT3645		two-component system sensor histidine kinase (NCBI ptt file)	no	0.20
18	BT1542		putative pyridine nucleotide-disulfide oxidoreductase (NCBI ptt file)	no	0.20
19	BT1260		putative peptidase (NCBI ptt file)	no	0.20
20	BT2959		conserved hypothetical protein (NCBI ptt file)	no	0.20

Or look for negative cofitness