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  • Top cofit genes for BT1618 from Bacteroides thetaiotaomicron VPI-5482

    putative anti-sigma factor (NCBI ptt file)
    SEED: putative anti-sigma factor

    Rank Hit Name Description Conserved? Cofitness  
    1 p5482_03 hypothetical protein (NCBI) no 0.27
    2 BT1248 putative transport protein (NCBI ptt file) no 0.24
    3 BT4165 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) 0.59 0.23
    4 BT1835 biotin synthase (NCBI ptt file) no 0.23
    5 BT2085 putative succinyl-diaminopimelate desuccinylase (NCBI ptt file) no 0.22
    6 BT2129 aspartate--ammonia ligase (NCBI ptt file) no 0.22
    7 BT2080 L-cysteine desulfidase cdsB (from data) no 0.22
    8 BT0533 tryptophan synthase beta chain (NCBI ptt file) no 0.22
    9 BT2522 Xaa-Pro aminopeptidase (NCBI ptt file) no 0.22
    10 BT0078 putative DNA repair protein (NCBI ptt file) no 0.22
    11 BT3910 conserved hypothetical protein (NCBI ptt file) no 0.22
    12 BT1152 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) no 0.22
    13 BT1970 glutamate dehydrogenase (NCBI ptt file) no 0.22
    14 BT0530 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) no 0.21
    15 BT2381 putative acetyltransferase (NCBI ptt file) no 0.21
    16 BT2430 hexokinase type III (NCBI ptt file) no 0.21
    17 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) no 0.21
    18 BT2991 hypothetical protein (NCBI ptt file) no 0.21
    19 BT3207 hypothetical protein (NCBI ptt file) no 0.21
    20 BT2912 putative glycosyslhydrolase (NCBI ptt file) no 0.21

    Or look for negative cofitness