Top cofit genes for BT1354 from Bacteroides thetaiotaomicron VPI-5482

putative flippase (NCBI ptt file)
SEED: O-antigen flippase Wzx

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT1346		capsule biosynthesis protein capA (NCBI ptt file)	no	0.89
2	BT1355		hypothetical protein (NCBI ptt file)	no	0.87
3	BT1340		putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file)	no	0.87
4	BT1343		putative capsule biosynthesis protein (NCBI ptt file)	no	0.87
5	BT1342		putative UDP-glucuronic acid epimerase (NCBI ptt file)	no	0.87
6	BT1339		undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file)	no	0.86
7	BT1345		glycosyltransferase (NCBI ptt file)	0.68	0.86
8	BT1352		putative glycosyltransferase HI1698 (NCBI ptt file)	no	0.86
9	BT1344		putative glycosyltransferase (NCBI ptt file)	no	0.85
10	BT1350		CDP-glucose 4,6-dehydratase (NCBI ptt file)	no	0.85
11	BT1347		conserved hypothetical protein (NCBI ptt file)	no	0.84
12	BT1356		putative capsule polysaccharide export protein (NCBI ptt file)	no	0.84
13	BT1358		putative transcriptional regulator (NCBI ptt file)	no	0.82
14	BT1348		CDP-abequose synthase (NCBI ptt file)	no	0.81
15	BT1351		glucose-1-phosphate cytidylyltransferase (NCBI ptt file)	no	0.79
16	BT1341		UDP-glucose 6-dehydrogenase (NCBI ptt file)	no	0.75
17	BT2263		hypothetical protein (NCBI ptt file)	no	0.74
18	BT0146		unsaturated glucuronyl hydrolase (NCBI ptt file)	no	0.74
19	BT2264		outer membrane protein Omp121 (NCBI ptt file)	no	0.73
20	BT1530		putative outer membrane protein OprM precursor (NCBI ptt file)	no	0.72

Or look for negative cofitness