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Cofit
Protein
Homologs
Top cofit genes for BT1113 from
Bacteroides thetaiotaomicron VPI-5482
flavodoxin (NCBI ptt file)
SEED: Flavodoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BT1753
putative methylated-DNA methyltransferase (NCBI ptt file)
no
0.26
2
p5482
_16
TraN-like protein (NCBI)
no
0.23
3
BT3434
hypothetical protein (NCBI ptt file)
no
0.23
4
BT4505
hypothetical protein (NCBI ptt file)
no
0.23
5
BT1359
Tetratricopeptide repeat family protein (NCBI ptt file)
no
0.22
6
BT2920
putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
no
0.22
7
BT2801
inositol-1-monophosphatase (NCBI ptt file)
no
0.22
8
BT3527
alpha-1,2-mannosidase (NCBI ptt file)
no
0.21
9
BT3440
hypothetical protein (NCBI ptt file)
no
0.20
10
BT4224
hypothetical protein (NCBI ptt file)
no
0.20
11
BT2647
hypothetical protein (NCBI ptt file)
no
0.20
12
BT2364
putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
no
0.20
13
BT0087
conserved protein found in conjugate transposon (NCBI ptt file)
no
0.19
14
BT4294
hypothetical protein (NCBI ptt file)
no
0.19
15
BT3495
putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
no
0.19
16
BT2922
beta-galactosidase (NCBI ptt file)
no
0.19
17
BT4763
conserved protein found in conjugate transposon (NCBI ptt file)
no
0.19
18
BT0682
two-component system response regulator (NCBI ptt file)
no
0.19
19
BT4496
putative oxidoreductase (NCBI ptt file)
0.39
0.19
20
BT3223
hypothetical protein (NCBI ptt file)
no
0.19
Or look for
negative cofitness