Top cofit genes for BT0305 from Bacteroides thetaiotaomicron VPI-5482

putative aminoglycoside efflux pump (Acriflavine resistance protein) (NCBI ptt file)
SEED: RND efflux system, inner membrane transporter CmeB

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT0304		acriflavine resistance protein A precursor (NCBI ptt file)	0.95	0.72
2	BT0306		outer membrane protein oprM precursor (NCBI ptt file)	0.93	0.70
3	BT3251		conserved hypothetical protein, putative integral membrane protein (NCBI ptt file)	no	0.58
4	BT3181		putative sulfate transporter, permease (NCBI ptt file)	0.58	0.57
5	BT2973		transcriptional regulator (NCBI ptt file)	no	0.53
6	BT3560		conserved hypothetical protein (NCBI ptt file)	no	0.52
7	BT0239		hypothetical protein (NCBI ptt file)	no	0.51
8	BT1533		conserved hypothetical protein (NCBI ptt file)	no	0.49
9	BT1528		two-component system sensor histidine kinase (NCBI ptt file)	no	0.49
10	BT2689		conserved hypothetical protein (NCBI ptt file)	no	0.45
11	BT1440		TonB-dependent receptor for vancomycin (SusC-like) (from data)	no	0.45
12	BT1532		ABC transporter permease (NCBI ptt file)	no	0.45
13	BT1529		two-component system response regulator (NCBI ptt file)	no	0.44
14	BT2121		putative Na+-driven multidrug efflux pump (NCBI ptt file)	no	0.44
15	BT2972		conserved hypothetical protein (NCBI ptt file)	no	0.44
16	BT1613		conserved hypothetical protein (NCBI ptt file)	no	0.43
17	BT4187		exo-alpha-D-galacturonosidase for catabolism of rhamnogalacturonan I and polygalacturonate (from data)	0.39	0.43
18	BT2425		K+-transporting ATPase A chain (NCBI ptt file)	no	0.42
19	BT3410		conserved hypothetical protein (NCBI ptt file)	no	0.42
20	BT2758		hypothetical protein (NCBI ptt file)	no	0.42

Or look for negative cofitness