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  • Top cofit genes for Rru_A3677 from Rhodospirillum rubrum S1H

    Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI)
    KEGG: C4-dicarboxylate transporter, DctQ subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3676 TRAP dicarboxylate transporter, DctM subunit (NCBI) 0.97 0.82
    2 Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) 0.98 0.81
    3 Rru_A0566 hypothetical protein (NCBI) no 0.69
    4 Rru_A3532 UspA (NCBI) no 0.68
    5 Rru_A1435 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) no 0.68
    6 Rru_A1436 Histidine Kinase (NCBI) no 0.68
    7 Rru_A2162 Phosphohistidine Phosphatase, SixA (NCBI) no 0.67
    8 Rru_A3204 C-terminal processing peptidase (NCBI) no 0.66
    9 Rru_A2541 hypothetical protein (NCBI) no 0.63
    10 Rru_A2562 CheW protein (NCBI) no 0.63
    11 Rru_A3420 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding (NCBI) no 0.62
    12 Rru_A3002 Nicotinamidase (NCBI) no 0.61
    13 Rru_A0446 hypothetical protein (NCBI) no 0.61
    14 Rru_A3517 Major facilitator superfamily MFS_1 (NCBI) no 0.61
    15 Rru_A2277 Nickel ABC transporter, periplasmic nickel-binding (NCBI) no 0.60
    16 Rru_A1616 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit (NCBI) no 0.60
    17 Rru_A1437 Sodium:dicarboxylate symporter (NCBI) 0.45 0.60
    18 Rru_A1817 TPR repeat (NCBI) no 0.60
    19 Rru_A2494 Glycosyl transferase, family 2 (NCBI) no 0.59
    20 Rru_A0064 squalene-phytoene synthase (NCBI) no 0.58

    Or look for negative cofitness