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  • Top cofit genes for Rru_A3660 from Rhodospirillum rubrum S1H

    tRNA and rRNA cytosine-C5-methylase (NCBI)
    SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase B

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0139 Transcriptional Regulator, MarR family (NCBI) no 0.62
    2 Rru_A0892 stress protein (NCBI) no 0.55
    3 Rru_A0753 Chaperone clpB (NCBI) 0.78 0.55
    4 Rru_A0242 Type III restriction enzyme, res subunit (NCBI) no 0.54
    5 Rru_A1893 Protein of unknown function DUF610, YibQ (NCBI) no 0.52
    6 Rru_A1140 Elongation factor G (NCBI) no 0.52
    7 Rru_A3681 YceI (NCBI) 0.36 0.52
    8 Rru_A0026 hypothetical protein (NCBI) no 0.51
    9 Rru_A3088 hypothetical protein (NCBI) no 0.51
    10 Rru_A0888 Transcriptional Regulator, TetR family (NCBI) no 0.50
    11 Rru_A2296 Protein of unknown function DUF165 (NCBI) no 0.50
    12 Rru_A3173 Transcriptional Regulator, TetR family (NCBI) no 0.50
    13 Rru_A2054 Hpt domain protein (NCBI) no 0.50
    14 Rru_A1777 Beta-N-acetylhexosaminidase (NCBI) 0.61 0.49
    15 Rru_A3600 Heat shock protein HslU (NCBI) 0.83 0.49
    16 Rru_A2919 hypothetical protein (NCBI) no 0.49
    17 Rru_A1545 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.49
    18 Rru_A2257 Transcriptional Regulator, LysR family (NCBI) no 0.48
    19 Rru_A2340 ABC transporter, transmembrane region (NCBI) no 0.48
    20 Rru_A1921 ABC transporter component (NCBI) no 0.48

    Or look for negative cofitness