Top cofit genes for Rru_A3644 from Rhodospirillum rubrum S1H

Uracil-DNA glycosylase superfamily (NCBI)
SEED: Hypothetical protein VC0266 (sugar utilization related?)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A1179		Transcriptional Regulator, DeoR family (NCBI)	no	0.70
2	Rru_A1836		O-acetylhomoserine/O-acetylserine sulfhydrylase (NCBI)	no	0.68
3	Rru_A0960		AmpD (negative regulator of AmpC) (NCBI)	no	0.62
4	Rru_A3362		Uroporphyrin-III C-methyltransferase-like (NCBI)	0.23	0.62
5	Rru_A1420		NADH dehydrogenase (quinone) (NCBI)	no	0.60
6	Rru_A3221		hypothetical protein (NCBI)	no	0.58
7	Rru_A2783		Predicted periplasmic ligand-binding sensor protein (NCBI)	no	0.57
8	Rru_A3305		ABC transporter component (NCBI)	no	0.57
9	Rru_A1657		Major facilitator superfamily MFS_1 (NCBI)	no	0.57
10	Rru_A3091		Glycosyl transferase, group 1 (NCBI)	no	0.56
11	Rru_A1730		nuclease (NCBI)	no	0.55
12	Rru_A1219		Sigma54 Specific Transcriptional Regulator containing PAS, and Fis DNA-binding domains (NCBI)	no	0.54
13	Rru_A3681		YceI (NCBI)	no	0.54
14	Rru_A0093		Binding-protein-dependent transport systems inner membrane component (NCBI)	0.57	0.53
15	Rru_A1972		Phosphoenolpyruvate-protein phosphotransferase (NCBI)	no	0.53
16	Rru_A0525		Two component Transcriptional regulator, Winged helix family (NCBI)	no	0.53
17	Rru_A2231		Glycosyl transferase, family 25 (NCBI)	no	0.53
18	Rru_A0281		Queuosine biosynthesis protein (NCBI)	0.29	0.52
19	Rru_A0861		Transcriptional Regulator, MarR family (NCBI)	no	0.52
20	Rru_A2193		Abc1 protein (NCBI)	no	0.52

Or look for negative cofitness