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  • Top cofit genes for Rru_A3634 from Rhodospirillum rubrum S1H

    Protein of unknown function UPF0001 (NCBI)
    SEED: Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1867 Protein of unknown function DUF583 (NCBI) no 0.66
    2 Rru_A3693 Protein of unknown function UPF0011 (NCBI) no 0.64
    3 Rru_A3203 ribonuclease R (NCBI) no 0.64
    4 Rru_A1950 Transcriptional regulator, ModE family (NCBI) no 0.64
    5 Rru_A1311 Transcriptional Regulator, MerR family (NCBI) no 0.63
    6 Rru_A1110 Sigma 32 (RpoH) (NCBI) 0.75 0.62
    7 Rru_A2985 Hydroxyneurosporene synthase (NCBI) no 0.61
    8 Rru_A0585 ABC transporter component (NCBI) no 0.61
    9 Rru_A0628 PUCC protein (NCBI) no 0.60
    10 Rru_A2999 Radical SAM (NCBI) no 0.60
    11 Rru_A0850 hypothetical protein (NCBI) no 0.59
    12 Rru_A2984 CrtD protein (NCBI) no 0.59
    13 Rru_A0634 Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) no 0.58
    14 Rru_A3000 Formate acetyltransferase (NCBI) no 0.57
    15 Rru_A0398 Thiol-disulfide isomerase and thioredoxins-like (NCBI) no 0.57
    16 Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) no 0.56
    17 Rru_A0151 hypothetical protein (NCBI) no 0.56
    18 Rru_A2559 hypothetical protein (NCBI) no 0.56
    19 Rru_A0664 Signal Transduction Histidine Kinase (NCBI) no 0.55
    20 Rru_A0275 Alpha/beta hydrolase fold (NCBI) no 0.55

    Or look for negative cofitness