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    • Top cofit genes for Rru_A3501 from Rhodospirillum rubrum S1H

    lipoprotein, putative (NCBI)
    SEED: Additional periplasmic component NikK of nickel ECF transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1984 nitrogen fixation-related protein (NCBI) no 0.68
    2 Rru_A0152 hypothetical protein (NCBI) no 0.63
    3 Rru_A0477 hypothetical protein (NCBI) no 0.58
    4 Rru_A1805 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) no 0.58
    5 Rru_A3489 hypothetical protein (NCBI) no 0.57
    6 Rru_A2186 putative transposase (NCBI) no 0.57
    7 Rru_A0144 NADH:flavin oxidoreductase/NADH oxidase (NCBI) no 0.57
    8 Rru_A1399 CheA Signal Transduction Histidine Kinases (STHK) (NCBI) no 0.56
    9 Rru_A3346 Polysaccharide biosynthesis protein (NCBI) no 0.56
    10 Rru_A1806 MotA/TolQ/ExbB proton channel (NCBI) no 0.55
    11 Rru_A0579 Glycosyl transferase, group 1 (NCBI) no 0.55
    12 Rru_A2995 hypothetical protein (NCBI) no 0.55
    13 Rru_A3187 Two component Transcriptional regulator, Winged helix family (NCBI) no 0.54
    14 Rru_A1465 hypothetical protein (NCBI) no 0.54
    15 Rru_A2715 Acyltransferase 3 (NCBI) no 0.54
    16 Rru_A2728 NnrU (NCBI) no 0.53
    17 Rru_A0693 Signal Transduction Histidine Kinase (NCBI) no 0.53
    18 Rru_A2614 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) no 0.52
    19 Rru_A0774 O-acetylhomoserine/O-acetylserine sulfhydrylase (NCBI) no 0.52
    20 Rru_A3519 Transcriptional Regulator, MarR family (NCBI) no 0.51

    Or look for negative cofitness