Top cofit genes for Rru_A3478 from Rhodospirillum rubrum S1H

Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A0979		extracellular solute-binding protein, family 5 (NCBI)	no	0.66
2	Rru_A2958		no description	no	0.56
3	Rru_A1575		hypothetical protein (NCBI)	no	0.56
4	Rru_A0096		Secretion protein HlyD (NCBI)	no	0.55
5	Rru_A2224		Transcriptional Regulator, MarR family (NCBI)	no	0.55
6	Rru_A2928		Secretion protein HlyD (NCBI)	no	0.54
7	Rru_A2995		hypothetical protein (NCBI)	no	0.53
8	Rru_A1981		Succinylglutamate desuccinylase/aspartoacylase (NCBI)	no	0.53
9	Rru_A2716		Acyltransferase 3 (NCBI)	no	0.52
10	Rru_A0319		NADH-ubiquinone oxidoreductase, chain 4L (NCBI)	no	0.51
11	Rru_A1283		Membrane-bound tetrahaem cytochrome TorC/YecK (NCBI)	no	0.51
12	Rru_A0761		Radical SAM (NCBI)	no	0.51
13	Rru_A1387		hypothetical protein (NCBI)	no	0.50
14	Rru_A2602		Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI)	no	0.50
15	Rru_A0042		hypothetical protein (NCBI)	no	0.49
16	Rru_A2452		hypothetical protein (NCBI)	no	0.49
17	Rru_A1453		Phage Tail Collar (NCBI)	no	0.49
18	Rru_A0763		Radical SAM (NCBI)	no	0.49
19	Rru_A2146		chemotaxis sensory transducer (NCBI)	no	0.49
20	Rru_A0836		hypothetical protein (NCBI)	no	0.48

Or look for negative cofitness