Top cofit genes for Rru_A3443 from Rhodospirillum rubrum S1H

PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI)
SEED: FIG056333: sensor

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A0350		Helix-turn-helix protein, CopG (NCBI)	no	0.68
2	Rru_A2300		inner-membrane translocator (NCBI)	no	0.67
3	Rru_A3130		ABC transporter component (NCBI)	no	0.66
4	Rru_A0810		hypothetical protein (NCBI)	no	0.64
5	Rru_A0223		Protein of unknown function DUF344 (NCBI)	no	0.63
6	Rru_A0300		Aminotransferase, class IV (NCBI)	no	0.61
7	Rru_A3015		Twin-arginine translocation pathway signal (NCBI)	no	0.61
8	Rru_A1343		hypothetical protein (NCBI)	no	0.60
9	Rru_A2863		Transcriptional Regulator, TetR family (NCBI)	no	0.60
10	Rru_A3104		Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI)	no	0.59
11	Rru_A1402		CheW protein (NCBI)	no	0.58
12	Rru_A2255		Uracil phosphoribosyl transferase (NCBI)	no	0.57
13	Rru_A2187		Serine/Threonine protein kinase (NCBI)	no	0.56
14	Rru_A1007		Nitrogenase-associated protein (NCBI)	no	0.55
15	Rru_A3117		Polysaccharide export protein (NCBI)	0.69	0.55
16	Rru_A0759		Aldo/keto reductase (NCBI)	no	0.54
17	Rru_A1401		chemotaxis sensory transducer (NCBI)	no	0.54
18	Rru_A3316		Phage integrase (NCBI)	no	0.53
19	Rru_A0328		Lysine exporter protein (LYSE/YGGA) (NCBI)	no	0.53
20	Rru_A3092		Parallel beta-helix repeat (NCBI)	no	0.53

Or look for negative cofitness