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    • Top cofit genes for Rru_A3441 from Rhodospirillum rubrum S1H

    Transcriptional Regulator, PadR-like family (NCBI)
    SEED: Transcriptional regulator, PadR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0439 extracellular solute-binding protein, family 3 (NCBI) no 0.54
    2 Rru_A3119 ATPases involved in chromosome partitioning-like (NCBI) no 0.53
    3 Rru_A1700 TatD-related deoxyribonuclease (NCBI) no 0.45
    4 Rru_A1660 Peptidase M23B (NCBI) no 0.44
    5 Rru_A1685 Small GTP-binding protein domain (NCBI) 0.56 0.42
    6 Rru_A1624 hypothetical protein (NCBI) no 0.41
    7 Rru_A2036 hypothetical protein (NCBI) no 0.40
    8 Rru_A3634 Protein of unknown function UPF0001 (NCBI) no 0.39
    9 Rru_A1412 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) no 0.39
    10 Rru_A1144 Benzoate membrane transport protein (NCBI) no 0.39
    11 Rru_A2856 putative flagellar protein FlaF (NCBI) no 0.39
    12 Rru_A2271 HesB/YadR/YfhF (NCBI) no 0.38
    13 Rru_A2612 UspA (NCBI) no 0.38
    14 Rru_A1040 Glu/Leu/Phe/Val dehydrogenase (NCBI) no 0.38
    15 Rru_A2222 Molybdopterin biosynthesis protein (NCBI) no 0.37
    16 Rru_A2179 Transcriptional Regulator, LuxR family (NCBI) no 0.37
    17 Rru_A0821 hypothetical protein (NCBI) no 0.37
    18 Rru_A0475 NADH:flavin oxidoreductase/NADH oxidase (NCBI) no 0.37
    19 Rru_A3673 Glutaconyl-CoA decarboxylase (NCBI) no 0.36
    20 Rru_A0786 Cystathionine gamma-synthase (NCBI) no 0.36

    Or look for negative cofitness