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  • Top cofit genes for Rru_A3416 from Rhodospirillum rubrum S1H

    inner-membrane translocator (NCBI)
    SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2144 hypothetical protein (RefSeq) no 0.68
    2 Rru_A3235 Secretion protein HlyD (NCBI) no 0.64
    3 Rru_A2018 hypothetical protein (NCBI) no 0.62
    4 Rru_A2545 hypothetical protein (NCBI) no 0.62
    5 Rru_A0495 hypothetical protein (NCBI) no 0.61
    6 Rru_A3195 Helix-turn-helix protein, CopG (NCBI) no 0.60
    7 Rru_A2828 hypothetical protein (NCBI) no 0.59
    8 Rru_A2197 3,4-Dihydroxy-2-butanone 4-phosphate synthase (NCBI) no 0.59
    9 Rru_A0776 Aspartate/tyrosine/aromatic aminotransferase (NCBI) no 0.59
    10 Rru_A3215 hypothetical protein (NCBI) no 0.59
    11 Rru_A0492 hypothetical protein (NCBI) no 0.58
    12 Rru_A1838 Alpha/beta hydrolase fold (NCBI) no 0.58
    13 Rru_A0227 hypothetical protein (NCBI) no 0.57
    14 Rru_A3194 SMF protein (NCBI) no 0.57
    15 Rru_A1236 Iojap-related protein (NCBI) no 0.57
    16 Rru_A1359 Ribose/galactose isomerase (NCBI) no 0.56
    17 Rru_A2099 surface antigen (NCBI) no 0.56
    18 Rru_A3357 Transcriptional Regulator, AraC family (NCBI) no 0.56
    19 Rru_A2888 hypothetical protein (NCBI) no 0.56
    20 Rru_A1688 hypothetical protein (NCBI) no 0.56

    Or look for negative cofitness