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Cofit
Protein
Homologs
Top cofit genes for Rru_A3396 from
Rhodospirillum rubrum S1H
Autoinducer synthesis protein (NCBI)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A3395
Transcriptional Regulator, LuxR family (NCBI)
0.63
0.80
2
Rru
_A2252
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI)
no
0.78
3
Rru
_A2223
Branched-chain amino acid aminotransferase I (NCBI)
no
0.76
4
Rru
_A2251
extracellular solute-binding protein, family 3 (NCBI)
no
0.75
5
Rru
_A2049
Transcriptional Regulator, TetR family (NCBI)
no
0.71
6
Rru
_A0435
Acyl-CoA dehydrogenase (NCBI)
no
0.71
7
Rru
_B0024
RepA-related protein (NCBI)
no
0.70
8
Rru
_A1642
putative sulfonate/nitrate transport system substrate-binding protein (NCBI)
no
0.69
9
Rru
_A2462
Enzymatic protein of unknown function (NCBI)
no
0.67
10
Rru
_A2025
Transcriptional activator, TenA family (NCBI)
no
0.66
11
Rru
_A0270
Protein of unknown function DUF525 (NCBI)
no
0.65
12
Rru
_A1312
AMP-dependent synthetase and ligase (NCBI)
no
0.64
13
Rru
_A3062
Methylmalonyl-CoA mutase-like (NCBI)
no
0.63
14
Rru
_A2363
Endonuclease/exonuclease/phosphatase (NCBI)
no
0.63
15
Rru
_A1834
Enoyl-CoA hydratase/isomerase (NCBI)
0.22
0.63
16
Rru
_A1935
Transcriptional Regulator, LuxR family (NCBI)
no
0.62
17
Rru
_A1998
ribulose-bisphosphate carboxylase-like protein; rubisco-like protein (NCBI)
no
0.62
18
Rru
_A2200
DNA polymerase III chi subunit, HolC (NCBI)
no
0.62
19
Rru
_A1348
Protein of unknown function DUF81 (NCBI)
no
0.62
20
Rru
_A2253
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI)
no
0.62
Or look for
negative cofitness