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  • Top cofit genes for Rru_A3393 from Rhodospirillum rubrum S1H

    Penicillin-binding protein 1A (NCBI)
    SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1536 UvrD/REP helicase (NCBI) no 0.87
    2 Rru_A2100 Protein of unknown function DUF81 (NCBI) 0.72 0.86
    3 Rru_A0574 Carboxylyase-related protein (NCBI) no 0.86
    4 Rru_A1804 N-acetyltransferase (NCBI) no 0.86
    5 Rru_A3694 hypothetical protein (NCBI) no 0.85
    6 Rru_A3547 hypothetical protein (NCBI) no 0.85
    7 Rru_A2363 Endonuclease/exonuclease/phosphatase (NCBI) no 0.83
    8 Rru_A1890 hypothetical protein (NCBI) no 0.83
    9 Rru_A0206 Cobalt chelatase, pCobS small subunit (NCBI) no 0.83
    10 Rru_A3533 hypothetical protein (NCBI) no 0.83
    11 Rru_A2399 conserved hypothetical protein VC1941 (NCBI) no 0.83
    12 Rru_A0643 Protein of unknown function DUF152 (NCBI) no 0.83
    13 Rru_A0159 Exodeoxyribonuclease VII (NCBI) 0.48 0.82
    14 Rru_A1837 Porphobilinogen synthase (NCBI) no 0.82
    15 Rru_A0399 Phosphoesterase, PA-phosphatase related (NCBI) no 0.80
    16 Rru_A1691 Spermine synthase (NCBI) no 0.79
    17 Rru_A0207 Cobalt chelatase, CobT subunit (NCBI) no 0.79
    18 Rru_A1571 metallo-beta-lactamase (NCBI) 0.66 0.78
    19 Rru_A2038 Glutamate-ammonia-ligase adenylyltransferase (NCBI) no 0.78
    20 Rru_A3627 Cobyrinic acid a,c-diamide synthase (NCBI) no 0.78

    Or look for negative cofitness