Top cofit genes for Rru_A3391 from Rhodospirillum rubrum S1H

Putative diguanylate cyclase (GGDEF domain) (NCBI)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A2359		Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI)	no	0.71
2	Rru_A2832		hypothetical protein (NCBI)	no	0.69
3	Rru_A3460		Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI)	no	0.66
4	Rru_A3706		Aminotransferase, class I and II (NCBI)	no	0.63
5	Rru_A0115		hypothetical protein (NCBI)	no	0.61
6	Rru_A0526		ATPase FliI/YscN (NCBI)	no	0.59
7	Rru_A2521		DNA helicase, putative (NCBI)	no	0.59
8	Rru_A2591		hypothetical protein (NCBI)	no	0.58
9	Rru_A1229		hypothetical protein (NCBI)	no	0.57
10	Rru_A3470		hypothetical protein (NCBI)	no	0.57
11	Rru_A0732		DNA repair protein RadC (NCBI)	no	0.57
12	Rru_A0384		NADPH-quinone reductase (NCBI)	no	0.57
13	Rru_A1500		Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI)	no	0.57
14	Rru_A3258		Ribonucleotide reductase large subunit (NCBI)	no	0.57
15	Rru_A0535		Protein of unknown function DUF6, transmembrane (NCBI)	no	0.56
16	Rru_A1390		hypothetical protein (NCBI)	no	0.56
17	Rru_A2775		Dienelactone hydrolase (NCBI)	no	0.56
18	Rru_A2840		flagellar motor switch protein FliM (NCBI)	no	0.55
19	Rru_A0726		Major facilitator superfamily MFS_1 (NCBI)	no	0.54
20	Rru_A3184		hypothetical protein (NCBI)	no	0.54

Or look for negative cofitness