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Cofit
Protein
Homologs
Top cofit genes for Rru_A3385 from
Rhodospirillum rubrum S1H
OmpA/MotB (NCBI)
SEED: OmpA/MotB domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A0560
Cytochrome bd ubiquinol oxidase, subunit I (NCBI)
no
0.71
2
Rru
_A1552
Peptidase S16, ATP-dependent protease La (NCBI)
no
0.67
3
Rru
_A3547
hypothetical protein (NCBI)
no
0.66
4
Rru
_A1571
metallo-beta-lactamase (NCBI)
no
0.64
5
Rru
_A1752
Excinuclease ABC, A subunit (NCBI)
no
0.64
6
Rru
_A1804
N-acetyltransferase (NCBI)
no
0.63
7
Rru
_A0399
Phosphoesterase, PA-phosphatase related (NCBI)
no
0.62
8
Rru
_A1357
Transaldolase AB (NCBI)
no
0.62
9
Rru
_A0360
Initiation factor 2B alpha/beta/delta (NCBI)
no
0.62
10
Rru
_A0021
Transcriptional Regulator, MarR family (NCBI)
no
0.61
11
Rru
_A0406
DNA repair protein RadA (NCBI)
no
0.60
12
Rru
_A0159
Exodeoxyribonuclease VII (NCBI)
no
0.60
13
Rru
_A2846
hypothetical protein (NCBI)
no
0.60
14
Rru
_A2440
NADH:ubiquinone oxidoreductase 17.2 kD subunit (NCBI)
no
0.59
15
Rru
_A3694
hypothetical protein (NCBI)
no
0.59
16
Rru
_A2004
Transcriptional Regulator, LysR family (NCBI)
no
0.59
17
Rru
_B0049
dTDP-4-dehydrorhamnose reductase (NCBI)
no
0.59
18
Rru
_A0265
Electron-transferring-flavoproteindehydrogenase (NCBI)
no
0.59
19
Rru
_A0091
PilT protein-like (NCBI)
no
0.59
20
Rru
_A3615
Protein of unknown function DUF299 (NCBI)
no
0.59
Or look for
negative cofitness