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  • Top cofit genes for Rru_A3360 from Rhodospirillum rubrum S1H

    Electron transport protein SCO1/SenC (NCBI)
    SEED: Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3305 ABC transporter component (NCBI) no 0.68
    2 Rru_A1757 Gid protein (NCBI) no 0.67
    3 Rru_A0273 Acetoacetyl-CoA reductase (NCBI) no 0.66
    4 Rru_A2413 Poly(R)-hydroxyalkanoic acid synthase, class I (NCBI) no 0.60
    5 Rru_A3203 ribonuclease R (NCBI) 0.60 0.60
    6 Rru_A0960 AmpD (negative regulator of AmpC) (NCBI) no 0.60
    7 Rru_A2398 Pyruvate-ferredoxin (flavodoxin) oxidoreductase (NCBI) 0.60 0.59
    8 Rru_A0500 extracellular solute-binding protein, family 1 (NCBI) no 0.58
    9 Rru_A1989 Asparagine synthase, glutamine-hydrolyzing (NCBI) no 0.57
    10 Rru_A1420 NADH dehydrogenase (quinone) (NCBI) no 0.57
    11 Rru_A0903 Pyruvate formate-lyase (NCBI) no 0.56
    12 Rru_A0120 chemotaxis sensory transducer (NCBI) no 0.56
    13 Rru_A3466 Ornithine aminotransferase (NCBI) no 0.56
    14 Rru_A0902 Peptidase C56, PfpI (NCBI) no 0.56
    15 Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) 0.74 0.56
    16 Rru_A0314 NADH dehydrogenase (quinone) (NCBI) no 0.55
    17 Rru_A0217 Citrate lyase (NCBI) no 0.55
    18 Rru_A0502 hypothetical protein (NCBI) no 0.54
    19 Rru_A2405 transketolase (NCBI) no 0.54
    20 Rru_A3693 Protein of unknown function UPF0011 (NCBI) 0.73 0.54

    Or look for negative cofitness