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  • Top cofit genes for Rru_A3356 from Rhodospirillum rubrum S1H

    Polyhydroxyalkanoate depolymerase (NCBI)
    SEED: Polyhydroxyalkanoic acid synthase
    KEGG: poly(3-hydroxybutyrate) depolymerase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0894 stress protein (NCBI) no 0.63
    2 Rru_B0005 Glycosyl transferase (NCBI) no 0.61
    3 Rru_A3079 3-hydroxybutyryl-CoA dehydrogenase (NCBI) no 0.58
    4 Rru_A3623 hypothetical protein (NCBI) no 0.57
    5 Rru_A3797 2-polyprenylphenol 6-hydroxylase (NCBI) no 0.57
    6 Rru_A0833 Protein of unknown function DUF48 (NCBI) no 0.57
    7 Rru_A0141 Porphobilinogen synthase (NCBI) no 0.55
    8 Rru_A0892 stress protein (NCBI) no 0.55
    9 Rru_A0599 Phosphate ABC transporter, permease protein PstC (NCBI) no 0.54
    10 Rru_A1294 Transcriptional Regulator, Histidine utilization repressor, GntR family (NCBI) 0.58 0.54
    11 Rru_A2732 hypothetical protein (NCBI) no 0.54
    12 Rru_A0231 hypothetical protein (NCBI) no 0.53
    13 Rru_A1318 hypothetical protein (NCBI) no 0.53
    14 Rru_A2154 Biopolymer transport protein ExbD/TolR (NCBI) no 0.52
    15 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) no 0.52
    16 Rru_A1477 hypothetical protein (NCBI) no 0.52
    17 Rru_A2466 Glyoxalase/bleomycin resistance protein/dioxygenase (NCBI) 0.64 0.52
    18 Rru_A0537 Protein of unknown function DUF955 (NCBI) no 0.51
    19 Rru_A3687 Cobalt transport protein (NCBI) no 0.51
    20 Rru_A0163 Transcriptional Regulator, XRE family (NCBI) no 0.51

    Or look for negative cofitness