Top cofit genes for Rru_A3349 from Rhodospirillum rubrum S1H

transcription activator, effector binding (NCBI)
SEED: Bacterial transcription activator, effector binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A2997		Phosphate acetyltransferase (NCBI)	no	0.73
2	Rru_A3457		hypothetical protein (NCBI)	no	0.70
3	Rru_A1832		GTP cyclohydrolase I (NCBI)	no	0.68
4	Rru_A1970		PTS fructose IIC component (NCBI)	no	0.67
5	Rru_A2786		inner-membrane translocator (NCBI)	no	0.65
6	Rru_A3712		Lysine exporter protein (LYSE/YGGA) (NCBI)	no	0.64
7	Rru_A0721		Anti-Sigm factor, ChrR (NCBI)	no	0.64
8	Rru_A2317		Pyruvate carboxylase (NCBI)	no	0.63
9	Rru_A3154		hypothetical protein (NCBI)	no	0.63
10	Rru_A1070		Heat shock protein Hsp20 (NCBI)	no	0.62
11	Rru_A1583		chemotaxis sensory transducer (NCBI)	no	0.62
12	Rru_A2783		Predicted periplasmic ligand-binding sensor protein (NCBI)	no	0.62
13	Rru_A1613		Cystathionine beta-lyase (NCBI)	no	0.61
14	Rru_A0854		Sulfotransferase (NCBI)	no	0.61
15	Rru_A1776		Peptidase M50 (NCBI)	no	0.61
16	Rru_A2999		Radical SAM (NCBI)	no	0.61
17	Rru_A1060		Transcriptional Regulator, LysR family (NCBI)	0.24	0.60
18	Rru_A2595		hypothetical protein (NCBI)	no	0.60
19	Rru_A1086		hypothetical protein (RefSeq)	no	0.60
20	Rru_A2258		hypothetical protein (NCBI)	no	0.60

Or look for negative cofitness