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  • Top cofit genes for Rru_A3345 from Rhodospirillum rubrum S1H

    Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI)
    SEED: GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0690 PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) no 0.71
    2 Rru_A1450 Transcriptional Regulator, ArsR family (NCBI) no 0.71
    3 Rru_A2443 HipA protein (NCBI) no 0.68
    4 Rru_A3242 Transcriptional Regulator, XRE family (NCBI) no 0.66
    5 Rru_A2348 Glycosyl transferase (NCBI) no 0.66
    6 Rru_A0765 hypothetical protein (NCBI) no 0.62
    7 Rru_A2351 Macrocin-O-methyltransferase (NCBI) no 0.61
    8 Rru_A2118 ATPase (NCBI) no 0.61
    9 Rru_A3308 putative transposase (NCBI) no 0.61
    10 Rru_A2567 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.60
    11 Rru_A2201 Peptidase S1C, Do (NCBI) no 0.60
    12 Rru_A2922 hypothetical protein (NCBI) no 0.60
    13 Rru_A0233 hypothetical protein (NCBI) no 0.59
    14 Rru_A0247 Periplasmic binding protein/LacI transcriptional regulator (NCBI) no 0.59
    15 Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) no 0.59
    16 Rru_A3049 Glycine dehydrogenase (decarboxylating) (NCBI) no 0.59
    17 Rru_A2336 Major facilitator superfamily MFS_1 (NCBI) no 0.59
    18 Rru_A3661 Major facilitator superfamily MFS_1 (NCBI) no 0.59
    19 Rru_A0157 Drug resistance transporter EmrB/QacA subfamily (NCBI) no 0.58
    20 Rru_A2715 Acyltransferase 3 (NCBI) no 0.58

    Or look for negative cofitness