Top cofit genes for Rru_A3333 from Rhodospirillum rubrum S1H

hypothetical protein (NCBI)
SEED: LSU m5C1962 methyltransferase RlmI
KEGG: ribosomal RNA large subunit methyltransferase I

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A2389		ABC transporter component (NCBI)	no	0.70
2	Rru_A2785		ABC transporter component (NCBI)	no	0.66
3	Rru_A2444		Transcriptional Regulator, TetR family (NCBI)	no	0.64
4	Rru_A0215		Protein of unknown function DUF6, transmembrane (NCBI)	no	0.62
5	Rru_A3799		DNA-formamidopyrimidine glycosylase (NCBI)	0.26	0.61
6	Rru_A1252		Glutamate--ammonia ligase (NCBI)	no	0.61
7	Rru_A3117		Polysaccharide export protein (NCBI)	no	0.61
8	Rru_A1403		chemotaxis sensory transducer (NCBI)	no	0.60
9	Rru_A0328		Lysine exporter protein (LYSE/YGGA) (NCBI)	0.19	0.58
10	Rru_A0633		Exonuclease (NCBI)	no	0.57
11	Rru_A0873		hypothetical protein (NCBI)	no	0.56
12	Rru_A2844		Flageller protein FlgA (NCBI)	no	0.55
13	Rru_A2831		Acyltransferase 3 (NCBI)	no	0.54
14	Rru_A3389		Protein of unknown function DUF403 (NCBI)	no	0.53
15	Rru_A2589		hypothetical protein (NCBI)	no	0.53
16	Rru_A3234		processing peptidase (NCBI)	no	0.53
17	Rru_A2388		ABC-3 transporter component (NCBI)	no	0.53
18	Rru_A3586		Peptidoglycan-binding LysM (NCBI)	no	0.53
19	Rru_A3028		Asparagine synthase (NCBI)	no	0.53
20	Rru_A0201		Endonuclease/exonuclease/phosphatase (NCBI)	no	0.51

Or look for negative cofitness