Top cofit genes for Rru_A3313 from Rhodospirillum rubrum S1H

minor capsid protein 10 (NCBI)
SEED: Phage capsid and scaffold

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A3314		Uncharacterized phage-encoded protein-like (NCBI)	no	0.70
2	Rru_A3316		Phage integrase (NCBI)	no	0.68
3	Rru_A3021		hypothetical protein (NCBI)	no	0.60
4	Rru_A1978		indolepyruvate ferredoxin oxidoreductase (NCBI)	no	0.60
5	Rru_A3715		Lipopolysaccharide biosynthesis (NCBI)	no	0.60
6	Rru_A0241		DNA methylase N-4/N-6 (NCBI)	no	0.60
7	Rru_A0605		hypothetical protein (NCBI)	no	0.59
8	Rru_A2300		inner-membrane translocator (NCBI)	no	0.59
9	Rru_A2101		Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI)	no	0.58
10	Rru_A1267		Carbohydrate kinase, FGGY (NCBI)	no	0.58
11	Rru_A3308		putative transposase (NCBI)	no	0.58
12	Rru_A2326		Response regulator receiver domain protein (CheY) (NCBI)	no	0.57
13	Rru_A1496		Glycosyl transferase, group 1 (NCBI)	no	0.57
14	Rru_A2550		L-carnitine dehydratase/bile acid-inducible protein F (NCBI)	no	0.56
15	Rru_A2993		hypothetical protein (NCBI)	no	0.56
16	Rru_A0765		hypothetical protein (NCBI)	no	0.56
17	Rru_A3104		Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI)	no	0.55
18	Rru_A0783		hypothetical protein (NCBI)	no	0.55
19	Rru_B0045		Phosphomannomutase (NCBI)	no	0.55
20	Rru_A3015		Twin-arginine translocation pathway signal (NCBI)	no	0.55

Or look for negative cofitness