Top cofit genes for Rru_A3311 from Rhodospirillum rubrum S1H

Plasmid maintenance system antidote protein (NCBI)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A2142		chemotaxis sensory transducer (NCBI)	no	0.65
2	Rru_A3226		putative enoyl-acyl carrier protein reductase (NCBI)	no	0.60
3	Rru_A0886		Hydrophobe/amphiphile efflux-1 HAE1 (NCBI)	no	0.57
4	Rru_A3745		hypothetical protein (NCBI)	no	0.57
5	Rru_A0198		hypothetical protein (NCBI)	no	0.55
6	Rru_A3495		hypothetical protein (NCBI)	no	0.55
7	Rru_A1545		Putative diguanylate cyclase (GGDEF domain) (NCBI)	no	0.54
8	Rru_A0129		hypothetical protein (NCBI)	no	0.53
9	Rru_A3525		hypothetical protein (NCBI)	no	0.53
10	Rru_A1618		hypothetical protein (NCBI)	no	0.52
11	Rru_A2103		L-carnitine dehydratase/bile acid-inducible protein F (NCBI)	no	0.51
12	Rru_A2881		virulence protein (NCBI)	no	0.51
13	Rru_A0184		Protein of unknown function DUF324 (NCBI)	no	0.51
14	Rru_A1298		ABC transporter component (NCBI)	no	0.50
15	Rru_A1516		Transposase and inactivated derivatives-like (NCBI)	no	0.50
16	Rru_A3074		4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like (NCBI)	no	0.49
17	Rru_A2321		chemotaxis sensory transducer (NCBI)	no	0.48
18	Rru_A1960		O-methyltransferase, family 3 (NCBI)	no	0.48
19	Rru_A3105		glycosyl transferases group 1 (NCBI)	no	0.48
20	Rru_A0391		hypothetical protein (NCBI)	no	0.48

Or look for negative cofitness