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  • Top cofit genes for Rru_A3307 from Rhodospirillum rubrum S1H

    inner-membrane translocator (NCBI)
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0463 Alanine racemase-like (NCBI) no 0.73
    2 Rru_A2715 Acyltransferase 3 (NCBI) no 0.62
    3 Rru_B0042 hypothetical protein (NCBI) no 0.60
    4 Rru_A2742 O-linked N-acetylglucosamine transferase SPINDLY family-like (NCBI) no 0.60
    5 Rru_A2351 Macrocin-O-methyltransferase (NCBI) no 0.59
    6 Rru_B0037 Hemolysin-type calcium-binding region (NCBI) no 0.58
    7 Rru_B0039 Type I secretion system ATPase, PrtD (NCBI) no 0.58
    8 Rru_A3182 Auxin Efflux Carrier (NCBI) 0.47 0.57
    9 Rru_A2477 Substrate-binding region of ABC-type glycine betaine transport system (NCBI) no 0.57
    10 Rru_A2336 Major facilitator superfamily MFS_1 (NCBI) no 0.57
    11 Rru_A2881 virulence protein (NCBI) no 0.56
    12 Rru_A2752 Signal Transduction Histidine Kinase (NCBI) no 0.55
    13 Rru_A0253 GDP-mannose 4,6-dehydratase (NCBI) no 0.55
    14 Rru_A3061 hypothetical protein (NCBI) no 0.54
    15 Rru_A0771 hypothetical protein (NCBI) no 0.54
    16 Rru_A2122 hypothetical protein (NCBI) no 0.54
    17 Rru_A2647 hypothetical protein (NCBI) no 0.53
    18 Rru_A3675 Glutathione S-transferase-like (NCBI) no 0.53
    19 Rru_A0441 chemotaxis sensory transducer (NCBI) no 0.52
    20 Rru_A1581 GCN5-related N-acetyltransferase (NCBI) no 0.52

    Or look for negative cofitness