Top cofit genes for Rru_A3229 from Rhodospirillum rubrum S1H

Two Component Transcriptional Regulator, LuxR family (NCBI)
SEED: Transcriptional regulator, LuxR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A3659		hypothetical protein (NCBI)	no	0.68
2	Rru_A1406		Two component CheB methylesterase (NCBI)	no	0.64
3	Rru_A0981		Binding-protein-dependent transport systems inner membrane component (NCBI)	no	0.63
4	Rru_A3437		Aminoglycoside phosphotransferase (NCBI)	0.65	0.60
5	Rru_A0361		Methylthioadenosine phosphorylase (NCBI)	no	0.59
6	Rru_A0401		hypothetical protein (NCBI)	no	0.59
7	Rru_A3457		hypothetical protein (NCBI)	no	0.59
8	Rru_A2228		Putative diguanylate cyclase (GGDEF domain) (NCBI)	no	0.58
9	Rru_A3153		conserved virulence factor protein (NCBI)	no	0.58
10	Rru_A0867		Peptidase C14, caspase catalytic subunit p20 (NCBI)	no	0.58
11	Rru_A0357		hypothetical protein (NCBI)	0.21	0.57
12	Rru_A3082		Predicted transcriptional regulator (NCBI)	no	0.57
13	Rru_A1583		chemotaxis sensory transducer (NCBI)	no	0.57
14	Rru_A2567		Putative diguanylate cyclase (GGDEF domain) (NCBI)	no	0.56
15	Rru_A3148		Protein of unknown function DUF323 (NCBI)	no	0.56
16	Rru_A2865		Peptidase M24 (NCBI)	no	0.55
17	Rru_A1669		Transcriptional Regulator, MerR family (NCBI)	no	0.55
18	Rru_A3054		Ribonuclease H (NCBI)	0.67	0.55
19	Rru_A0643		Protein of unknown function DUF152 (NCBI)	0.77	0.55
20	Rru_A1060		Transcriptional Regulator, LysR family (NCBI)	no	0.54

Or look for negative cofitness