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  • Top cofit genes for Rru_A3222 from Rhodospirillum rubrum S1H

    transport system permease protein (NCBI)
    SEED: Vitamin B12 ABC transporter, permease component BtuC
    KEGG: iron complex transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1622 Transcriptional Regulator, Crp/Fnr family (NCBI) no 0.67
    2 Rru_A2638 hypothetical protein (NCBI) no 0.58
    3 Rru_A3002 Nicotinamidase (NCBI) no 0.57
    4 Rru_A3182 Auxin Efflux Carrier (NCBI) no 0.53
    5 Rru_A2344 hypothetical protein (NCBI) no 0.52
    6 Rru_A2604 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) no 0.52
    7 Rru_A2212 hypothetical protein (NCBI) no 0.51
    8 Rru_A0506 Glycoside hydrolase (NCBI) no 0.51
    9 Rru_A2477 Substrate-binding region of ABC-type glycine betaine transport system (NCBI) no 0.51
    10 Rru_A0104 Alpha-2-macroglobulin-like protein (NCBI) no 0.51
    11 Rru_A0287 hypothetical protein (NCBI) no 0.51
    12 Rru_A1033 Protein of unknown function DUF892 (NCBI) no 0.50
    13 Rru_A0277 hypothetical protein (NCBI) no 0.50
    14 Rru_A3007 SOUL heme-binding protein (NCBI) no 0.49
    15 Rru_A2302 Periplasmic binding protein/LacI transcriptional regulator (NCBI) no 0.49
    16 Rru_A2141 Protein of unknown function DUF6, transmembrane (NCBI) no 0.49
    17 Rru_A3083 NADPH-dependent FMN reductase (NCBI) no 0.48
    18 Rru_A0144 NADH:flavin oxidoreductase/NADH oxidase (NCBI) no 0.48
    19 Rru_A0759 Aldo/keto reductase (NCBI) no 0.48
    20 Rru_A1694 hypothetical protein (NCBI) no 0.47

    Or look for negative cofitness