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  • Top cofit genes for Rru_A3202 from Rhodospirillum rubrum S1H

    DNA topoisomerase (NCBI)
    SEED: DNA topoisomerase I (EC 5.99.1.2)
    KEGG: DNA topoisomerase I

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2115 Phosphoglucomutase/phosphomannomutase (NCBI) no 0.80
    2 Rru_A2411 Aminotransferase, class I and II (NCBI) 0.61 0.80
    3 Rru_A1854 Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) 0.54 0.76
    4 Rru_A1855 hypothetical protein (NCBI) no 0.74
    5 Rru_A0614 hypothetical protein (NCBI) no 0.73
    6 Rru_A2497 Peptide chain release factor 3 (NCBI) 0.30 0.72
    7 Rru_A3067 Transcriptional Regulator, TetR family (NCBI) no 0.72
    8 Rru_A3788 Ferric uptake regulator (FUR) family (NCBI) no 0.71
    9 Rru_A0432 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) 0.71 0.70
    10 Rru_A1607 4-alpha-glucanotransferase (NCBI) 0.37 0.70
    11 Rru_A2246 Glucose-1-phosphate adenylyltransferase (NCBI) no 0.70
    12 Rru_A1675 Cytochrome c assembly protein (NCBI) no 0.69
    13 Rru_A1527 ABC transporter component (NCBI) 0.40 0.69
    14 Rru_A2771 Histidinol dehydrogenase (NCBI) 0.57 0.67
    15 Rru_A2264 ferredoxin (NCBI) no 0.66
    16 Rru_A1411 Protein of unknown function DUF162 (NCBI) no 0.66
    17 Rru_A2265 Electron transfer flavoprotein-ubiquinone oxidoreductase (NCBI) 0.29 0.66
    18 Rru_A1606 Glycogen debranching enzyme GlgX (NCBI) no 0.65
    19 Rru_A2267 Electron transfer flavoprotein beta-subunit (NCBI) no 0.65
    20 Rru_A2266 Electron transfer flavoprotein (NCBI) 0.34 0.65

    Or look for negative cofitness