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Cofit
Protein
Homologs
Top cofit genes for Rru_A3197 from
Rhodospirillum rubrum S1H
HicB (NCBI)
SEED: HicB protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A1854
Pyridoxal phosphate biosynthetic protein PdxJ (NCBI)
no
0.59
2
Rru
_A1605
Alpha amylase, catalytic region (NCBI)
no
0.58
3
Rru
_A0477
hypothetical protein (NCBI)
no
0.55
4
Rru
_A2125
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like (NCBI)
no
0.53
5
Rru
_A0432
4-hydroxythreonine-4-phosphate dehydrogenase (NCBI)
no
0.53
6
Rru
_A2162
Phosphohistidine Phosphatase, SixA (NCBI)
no
0.53
7
Rru
_A2730
hypothetical protein (NCBI)
no
0.53
8
Rru
_A3518
2-dehydropantoate 2-reductase (NCBI)
no
0.52
9
Rru
_A2173
Leucyl aminopeptidase (NCBI)
no
0.51
10
Rru
_A3157
hypothetical protein (NCBI)
no
0.51
11
Rru
_A1855
hypothetical protein (NCBI)
no
0.50
12
Rru
_A2405
transketolase (NCBI)
no
0.50
13
Rru
_A1986
Protein of unknown function DUF1526 (NCBI)
no
0.49
14
Rru
_A0462
Aldehyde dehydrogenase (NCBI)
no
0.49
15
Rru
_A0693
Signal Transduction Histidine Kinase (NCBI)
no
0.49
16
Rru
_A0559
Alpha/beta hydrolase fold (NCBI)
no
0.49
17
Rru
_A1640
Multiple resistance and pH regulation protein F (NCBI)
no
0.48
18
Rru
_A2411
Aminotransferase, class I and II (NCBI)
no
0.48
19
Rru
_A1441
Transcriptional Regulator, MarR family (NCBI)
no
0.47
20
Rru
_A1411
Protein of unknown function DUF162 (NCBI)
no
0.47
Or look for
negative cofitness