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  • Top cofit genes for Rru_A3195 from Rhodospirillum rubrum S1H

    Helix-turn-helix protein, CopG (NCBI)
    SEED: RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1926 hypothetical protein (NCBI) no 0.80
    2 Rru_A3149 Protein of unknown function DUF214 (NCBI) no 0.79
    3 Rru_A1064 Plasmid maintenance system killer (NCBI) no 0.72
    4 Rru_A2997 Phosphate acetyltransferase (NCBI) no 0.71
    5 Rru_A0917 Methionine adenosyltransferase (NCBI) no 0.70
    6 Rru_A0776 Aspartate/tyrosine/aromatic aminotransferase (NCBI) no 0.69
    7 Rru_A2869 Exopolysaccharide synthesis, ExoD (NCBI) no 0.68
    8 Rru_A2786 inner-membrane translocator (NCBI) no 0.68
    9 Rru_A3150 ABC transporter component (NCBI) no 0.68
    10 Rru_A1439 Putative FecR (NCBI) no 0.67
    11 Rru_A3800 hypothetical protein (NCBI) no 0.67
    12 Rru_A1381 Short chain fatty acid transporter (NCBI) no 0.66
    13 Rru_A2154 Biopolymer transport protein ExbD/TolR (NCBI) no 0.66
    14 Rru_A1179 Transcriptional Regulator, DeoR family (NCBI) no 0.66
    15 Rru_A0289 NUDIX hydrolase (NCBI) no 0.65
    16 Rru_A2565 no description no 0.65
    17 Rru_A2050 Secretion protein HlyD (NCBI) no 0.65
    18 Rru_A3626 Glucose inhibited division protein (NCBI) no 0.64
    19 Rru_A2099 surface antigen (NCBI) no 0.64
    20 Rru_A0991 Protein of unknown function UPF0126 (NCBI) no 0.64

    Or look for negative cofitness