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  • Top cofit genes for Rru_A3135 from Rhodospirillum rubrum S1H

    Orn/DAP/Arg decarboxylase 2 (NCBI)
    SEED: Diaminopimelate decarboxylase (EC 4.1.1.20)
    KEGG: diaminopimelate decarboxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1302 Formiminoglutamate deiminase (NCBI) no 0.72
    2 Rru_A1683 HAD-superfamily hydrolase, subfamily IA, variant 1 (NCBI) no 0.71
    3 Rru_A1384 Multi-sensor Signal Transduction Histidine Kinase (NCBI) no 0.70
    4 Rru_A0025 hypothetical protein (NCBI) no 0.69
    5 Rru_A1970 PTS fructose IIC component (NCBI) no 0.68
    6 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) no 0.67
    7 Rru_A1326 hypothetical protein (NCBI) no 0.67
    8 Rru_A0890 Integral membrane protein TerC (NCBI) no 0.67
    9 Rru_A2155 MotA/TolQ/ExbB proton channel (NCBI) no 0.67
    10 Rru_A0150 hypothetical protein (NCBI) no 0.67
    11 Rru_A2750 Secretion protein HlyD (NCBI) no 0.67
    12 Rru_A2707 Alpha/beta hydrolase fold (NCBI) no 0.66
    13 Rru_A2228 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.66
    14 Rru_A3540 hypothetical protein (NCBI) no 0.66
    15 Rru_A1047 6-phosphofructokinase (NCBI) no 0.66
    16 Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins (NCBI) no 0.64
    17 Rru_A1180 Major facilitator superfamily MFS_1 (NCBI) no 0.64
    18 Rru_A0137 TRAP transporter solute receptor, TAXI family (NCBI) no 0.63
    19 Rru_A3528 hypothetical protein (NCBI) no 0.63
    20 Rru_A3600 Heat shock protein HslU (NCBI) 0.46 0.63

    Or look for negative cofitness