Top cofit genes for Rru_A3059 from Rhodospirillum rubrum S1H

Protein of unknown function DUF179 (NCBI)
SEED: UPF0301 protein YqgE
KEGG: putative transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A2424		Gamma-glutamyltranspeptidase (NCBI)	no	0.78
2	Rru_A2157		CHAP (NCBI)	no	0.72
3	Rru_A1268		HAD-superfamily hydrolase subfamily IA, variant 3 (NCBI)	0.55	0.71
4	Rru_A2263		ATPase, E1-E2 type (NCBI)	no	0.70
5	Rru_A1450		Transcriptional Regulator, ArsR family (NCBI)	no	0.69
6	Rru_A0522		Response regulator receiver domain protein (CheY) (NCBI)	0.41	0.69
7	Rru_A0283		hypothetical protein (NCBI)	no	0.68
8	Rru_A3363		PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI)	no	0.68
9	Rru_A1288		Molybdenum cofactor synthesis protein (NCBI)	no	0.67
10	Rru_A2136		hypothetical protein (NCBI)	no	0.67
11	Rru_A2923		hypothetical protein (NCBI)	no	0.67
12	Rru_A2750		Secretion protein HlyD (NCBI)	no	0.66
13	Rru_A1293		chemotaxis sensory transducer (NCBI)	no	0.65
14	Rru_A0488		TonB-dependent receptor (NCBI)	0.51	0.65
15	Rru_A1016		Binding-protein-dependent transport systems inner membrane component (NCBI)	0.23	0.64
16	Rru_A2078		chemotaxis sensory transducer (NCBI)	no	0.64
17	Rru_A0315		NADH dehydrogenase (quinone) (NCBI)	no	0.63
18	Rru_A3253		MJ0042 finger-like region (NCBI)	no	0.63
19	Rru_A0848		Major facilitator superfamily MFS_1 (NCBI)	no	0.63
20	Rru_A0808		type II secretion system protein E (NCBI)	0.53	0.63

Or look for negative cofitness