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Cofit
Protein
Homologs
Top cofit genes for Rru_A3035 from
Rhodospirillum rubrum S1H
nuclease (SNase-like) (NCBI)
SEED: Bll0575 protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A0989
Twin-arginine translocation pathway signal (NCBI)
no
0.55
2
Rru
_A2742
O-linked N-acetylglucosamine transferase SPINDLY family-like (NCBI)
no
0.54
3
Rru
_A2121
hypothetical protein (NCBI)
no
0.54
4
Rru
_B0040
Type I secretion membrane fusion protein, HlyD (NCBI)
no
0.52
5
Rru
_B0039
Type I secretion system ATPase, PrtD (NCBI)
no
0.50
6
Rru
_A0253
GDP-mannose 4,6-dehydratase (NCBI)
no
0.50
7
Rru
_A2538
hypothetical protein (NCBI)
no
0.50
8
Rru
_A2649
extracellular endo alpha-1 4 polygalactosaminidase or related polysaccharide hydrolase-like (NCBI)
no
0.49
9
Rru
_A3509
AMP-dependent synthetase and ligase (NCBI)
no
0.49
10
Rru
_A2535
Flagellar hook-associated protein 2 (FliD, filament cap protein) (NCBI)
no
0.49
11
Rru
_A2377
Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI)
no
0.48
12
Rru
_A0089
ATP-dependent DNA helicase RecQ (NCBI)
no
0.48
13
Rru
_A2740
UDP-N-acetylglucosamine 2-epimerase (NCBI)
no
0.48
14
Rru
_A3092
Parallel beta-helix repeat (NCBI)
no
0.47
15
Rru
_A2483
5'-Nucleotidase (NCBI)
no
0.47
16
Rru
_A1293
chemotaxis sensory transducer (NCBI)
no
0.47
17
Rru
_A2000
hypothetical protein (NCBI)
no
0.47
18
Rru
_A0175
CRISPR-associated helicase Cas3, core (NCBI)
no
0.47
19
Rru
_A2227
GCN5-related N-acetyltransferase (NCBI)
no
0.46
20
Rru
_A1608
MscS Mechanosensitive ion channel (NCBI)
no
0.46
Or look for
negative cofitness