Top cofit genes for Rru_A2901 from Rhodospirillum rubrum S1H

Histidine triad (HIT) protein (NCBI)
SEED: HIT1 PROTEIN

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A3322		Transcriptional Regulator, Crp/Fnr family (NCBI)	no	0.84
2	Rru_A0554		Rh-like protein/ammonium transporter (NCBI)	no	0.81
3	Rru_A3704		Periplasmic solute binding protein (NCBI)	no	0.79
4	Rru_A3167		Binding-protein-dependent transport systems inner membrane component (NCBI)	no	0.79
5	Rru_A1803		Undecaprenol kinase (NCBI)	0.43	0.78
6	Rru_A3694		hypothetical protein (NCBI)	no	0.78
7	Rru_A1767		peptidase M23B (NCBI)	no	0.78
8	Rru_A0712		Transcriptional Regulator, XRE family (NCBI)	no	0.77
9	Rru_A3148		Protein of unknown function DUF323 (NCBI)	no	0.76
10	Rru_A1636		NADH-ubiquinone oxidoreductase, chain 4L (NCBI)	no	0.76
11	Rru_A1692		S-adenosylmethionine decarboxylase related (NCBI)	no	0.76
12	Rru_A1357		Transaldolase AB (NCBI)	0.74	0.75
13	Rru_A1536		UvrD/REP helicase (NCBI)	no	0.75
14	Rru_A2626		chaperone DnaJ (NCBI)	no	0.75
15	Rru_A1804		N-acetyltransferase (NCBI)	0.62	0.75
16	Rru_A3544		Phosphate uptake regulator, PhoU (NCBI)	no	0.74
17	Rru_A3520		Protein of unknown function UPF0118 (NCBI)	no	0.74
18	Rru_A3151		serine/threonine protein kinase (NCBI)	no	0.74
19	Rru_A0399		Phosphoesterase, PA-phosphatase related (NCBI)	no	0.73
20	Rru_A1669		Transcriptional Regulator, MerR family (NCBI)	no	0.72

Or look for negative cofitness