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  • Top cofit genes for Rru_A2899 from Rhodospirillum rubrum S1H

    Transcriptional Regulator, LysR family (NCBI)
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3273 Protein of unknown function DUF1470 (NCBI) no 0.79
    2 Rru_A0695 2-isopropylmalate synthase/homocitrate synthase (NCBI) no 0.74
    3 Rru_A2660 AAA ATPase, central region (NCBI) 0.32 0.73
    4 Rru_A1016 Binding-protein-dependent transport systems inner membrane component (NCBI) no 0.72
    5 Rru_A2443 HipA protein (NCBI) no 0.72
    6 Rru_A3697 Fumarylacetoacetate (FAA) hydrolase (NCBI) no 0.71
    7 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) no 0.70
    8 Rru_A2567 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.70
    9 Rru_A3669 Uncharacterized protein UPF0114 (NCBI) no 0.68
    10 Rru_A0041 Cytochrome c, class II (NCBI) no 0.68
    11 Rru_A2244 Glycogen/starch/alpha-glucan phosphorylase (NCBI) no 0.68
    12 Rru_A3208 Protein of unknown function DUF29 (NCBI) no 0.67
    13 Rru_A3027 Sulfotransferase (NCBI) no 0.67
    14 Rru_A1047 6-phosphofructokinase (NCBI) no 0.67
    15 Rru_A1481 hypothetical protein (NCBI) no 0.67
    16 Rru_A2494 Glycosyl transferase, family 2 (NCBI) no 0.67
    17 Rru_A0258 Peptidase M48, Ste24p (NCBI) no 0.67
    18 Rru_A1085 Metallophosphoesterase (NCBI) no 0.67
    19 Rru_A1658 AMP-dependent synthetase and ligase (NCBI) no 0.66
    20 Rru_A0488 TonB-dependent receptor (NCBI) no 0.66

    Or look for negative cofitness