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  • Top cofit genes for Rru_A2887 from Rhodospirillum rubrum S1H

    GreA/GreB family elongation factor (NCBI)
    SEED: Transcription elongation factor GreA
    KEGG: transcription elongation factor GreA

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1086 hypothetical protein (RefSeq) 0.81 0.58
    2 Rru_A0576 chemotaxis sensory transducer (NCBI) no 0.57
    3 Rru_A3322 Transcriptional Regulator, Crp/Fnr family (NCBI) no 0.56
    4 Rru_A2994 hypothetical protein (NCBI) no 0.55
    5 Rru_A3208 Protein of unknown function DUF29 (NCBI) no 0.55
    6 Rru_A2163 conserved hypothetical protein RP631 (NCBI) no 0.55
    7 Rru_A3329 hypothetical protein (NCBI) 0.41 0.55
    8 Rru_A0671 cobalamin synthesis CobW protein (NCBI) no 0.53
    9 Rru_A0937 Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like (NCBI) no 0.53
    10 Rru_A2870 integral membrane protein TerC (NCBI) 0.81 0.52
    11 Rru_A0697 Multi antimicrobial extrusion protein MatE (NCBI) no 0.52
    12 Rru_A1117 Secretion protein HlyD (NCBI) 0.52 0.51
    13 Rru_A1868 Peptidase M23B (NCBI) no 0.51
    14 Rru_A1481 hypothetical protein (NCBI) no 0.51
    15 Rru_A3495 hypothetical protein (NCBI) no 0.51
    16 Rru_A0010 Sigma-54 (RpoN) (NCBI) no 0.51
    17 Rru_A2248 hypothetical protein (NCBI) no 0.50
    18 Rru_A1677 Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) no 0.50
    19 Rru_A0770 Peptidase M23B (NCBI) no 0.50
    20 Rru_A0393 NUDIX hydrolase (NCBI) no 0.50

    Or look for negative cofitness