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  • Top cofit genes for Rru_A2871 from Rhodospirillum rubrum S1H

    Peptidase M20D, amidohydrolase (NCBI)
    SEED: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
    KEGG: hippurate hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2372 Sigma-24 (FecI) (NCBI) no 0.60
    2 Rru_A2741 Polysaccharide biosynthesis protein CapD (NCBI) no 0.54
    3 Rru_A0527 hypothetical protein (NCBI) no 0.53
    4 Rru_A1497 Cyclic peptide transporter (NCBI) 0.41 0.52
    5 Rru_A2550 L-carnitine dehydratase/bile acid-inducible protein F (NCBI) 0.43 0.52
    6 Rru_A2604 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) no 0.52
    7 Rru_A2278 Transposase IS66 (NCBI) no 0.51
    8 Rru_A1269 Rv0623-like transcription factor (NCBI) no 0.51
    9 Rru_A3124 Alpha/beta hydrolase fold (NCBI) no 0.51
    10 Rru_A3170 Surface presentation of antigens (SPOA) protein (NCBI) no 0.50
    11 Rru_A2501 conserved hypothetical cytosolic protein (NCBI) no 0.50
    12 Rru_A2305 Haloacid dehalogenase-like hydrolase (NCBI) no 0.49
    13 Rru_A1463 Sulfotransferase (NCBI) no 0.49
    14 Rru_A0873 hypothetical protein (NCBI) no 0.49
    15 Rru_A2136 hypothetical protein (NCBI) no 0.49
    16 Rru_A1626 methyltransferase (NCBI) no 0.48
    17 Rru_A2096 Cell divisionFtsK/SpoIIIE (NCBI) no 0.48
    18 Rru_A3293 two-component response regulator (NarL subfamily) (NCBI) no 0.48
    19 Rru_A0348 CRISPR-associated protein, Cas2 (NCBI) no 0.47
    20 Rru_A2048 ABC transporter component (NCBI) no 0.47

    Or look for negative cofitness