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  • Top cofit genes for Rru_A2847 from Rhodospirillum rubrum S1H

    Transcriptional regulators, TraR/DksA family (NCBI)
    SEED: C4-type zinc finger protein, DksA/TraR family
    KEGG: DnaK suppressor protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3558 Protein of unknown function UPF0005 (NCBI) no 0.86
    2 Rru_A2100 Protein of unknown function DUF81 (NCBI) 0.71 0.83
    3 Rru_A3533 hypothetical protein (NCBI) no 0.83
    4 Rru_A1804 N-acetyltransferase (NCBI) no 0.82
    5 Rru_A1837 Porphobilinogen synthase (NCBI) 0.68 0.78
    6 Rru_A0574 Carboxylyase-related protein (NCBI) 0.36 0.77
    7 Rru_A2363 Endonuclease/exonuclease/phosphatase (NCBI) no 0.77
    8 Rru_A1691 Spermine synthase (NCBI) no 0.77
    9 Rru_A3393 Penicillin-binding protein 1A (NCBI) 0.74 0.75
    10 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.92 0.75
    11 Rru_A1890 hypothetical protein (NCBI) 0.61 0.75
    12 Rru_A0596 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype (NCBI) 0.61 0.75
    13 Rru_A0206 Cobalt chelatase, pCobS small subunit (NCBI) 0.61 0.75
    14 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) 0.70 0.74
    15 Rru_A2370 GCN5-related N-acetyltransferase (NCBI) no 0.73
    16 Rru_A0671 cobalamin synthesis CobW protein (NCBI) no 0.73
    17 Rru_A3547 hypothetical protein (NCBI) no 0.73
    18 Rru_A0683 3-deoxy-7-phosphoheptulonate synthase (NCBI) 0.84 0.72
    19 Rru_A2983 Polyprenyl synthetase (NCBI) no 0.71
    20 Rru_A1536 UvrD/REP helicase (NCBI) 0.61 0.70

    Or look for negative cofitness