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  • Top cofit genes for Rru_A2616 from Rhodospirillum rubrum S1H

    Histone deacetylase superfamily (NCBI)
    SEED: Acetylspermidine deacetylase (EC 3.5.1.48); Deacetylases, including yeast histone deacetylase and acetoin utilization protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2398 Pyruvate-ferredoxin (flavodoxin) oxidoreductase (NCBI) no 0.84
    2 Rru_A1201 MaoC-like dehydratase (NCBI) no 0.77
    3 Rru_A0217 Citrate lyase (NCBI) no 0.76
    4 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.38 0.69
    5 Rru_A1200 Citrate lyase (NCBI) 0.26 0.68
    6 Rru_A3445 Phosphoenolpyruvate-protein phosphotransferase (NCBI) 0.65 0.66
    7 Rru_A3064 Isovaleryl-CoA dehydrogenase (NCBI) no 0.66
    8 Rru_A3062 Methylmalonyl-CoA mutase-like (NCBI) no 0.65
    9 Rru_A2426 LrgA (NCBI) 0.46 0.64
    10 Rru_A0435 Acyl-CoA dehydrogenase (NCBI) 0.46 0.63
    11 Rru_A3203 ribonuclease R (NCBI) 0.53 0.61
    12 Rru_A3011 Isochorismatase hydrolase (NCBI) no 0.60
    13 Rru_A3462 Cold-shock DNA-binding domain protein (NCBI) no 0.60
    14 Rru_A2181 NAD(P) transhydrogenase, beta subunit (NCBI) 0.89 0.59
    15 Rru_A2183 NAD(P)(+) transhydrogenase (AB-specific) (NCBI) 0.88 0.59
    16 Rru_A2309 NADH peroxidase (NCBI) no 0.59
    17 Rru_A2560 Transglutaminase-like (NCBI) no 0.59
    18 Rru_A3504 putative phenylacetate-CoA ligase (NCBI) 0.34 0.58
    19 Rru_A3206 Response regulator receiver domain protein (CheY) (NCBI) no 0.57
    20 Rru_A2413 Poly(R)-hydroxyalkanoic acid synthase, class I (NCBI) 0.54 0.54

    Or look for negative cofitness