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Cofit
Protein
Homologs
Top cofit genes for Rru_A2609 from
Rhodospirillum rubrum S1H
hypothetical protein (NCBI)
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A2334
nucleoside-diphosphate-sugar epimerase (NCBI)
no
0.47
2
Rru
_A1815
Glycolate reductase (NCBI)
no
0.44
3
Rru
_A2444
Transcriptional Regulator, TetR family (NCBI)
no
0.44
4
Rru
_A1790
ABC-2 transporter component (NCBI)
no
0.42
5
Rru
_A3104
Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI)
no
0.42
6
Rru
_A0216
Transcriptional Regulator, AsnC family (NCBI)
no
0.42
7
Rru
_A0499
Binding-protein-dependent transport systems inner membrane component (NCBI)
no
0.42
8
Rru
_A1333
BioY protein (NCBI)
no
0.42
9
Rru
_A1267
Carbohydrate kinase, FGGY (NCBI)
no
0.42
10
Rru
_A1714
Transcriptional Regulator, LysR family (NCBI)
no
0.42
11
Rru
_A2845
Flagellar L-ring protein (NCBI)
no
0.41
12
Rru
_B0010
Resolvase (NCBI)
no
0.41
13
Rru
_A2863
Transcriptional Regulator, TetR family (NCBI)
no
0.41
14
Rru
_A0340
CRISPR-associated helicase Cas3, core (NCBI)
no
0.41
15
Rru
_A2101
Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI)
no
0.40
16
Rru
_A0203
hypothetical protein (NCBI)
no
0.40
17
Rru
_A2082
Hemerythrin HHE cation binding region (NCBI)
no
0.39
18
Rru
_A1055
Protein of unknown function DUF1013 (NCBI)
no
0.39
19
Rru
_A2757
chemotaxis sensory transducer (NCBI)
no
0.38
20
Rru
_A1486
UDP-glucose 4-epimerase (NCBI)
no
0.38
Or look for
negative cofitness