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Cofit
Protein
Homologs
Top cofit genes for Rru_A2587 from
Rhodospirillum rubrum S1H
hypothetical protein (NCBI)
SEED: Phage capsid protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A0048
Lysine exporter protein (LYSE/YGGA) (NCBI)
no
0.79
2
Rru
_A0395
PpiC-type peptidyl-prolyl cis-trans isomerase (NCBI)
no
0.71
3
Rru
_A1381
Short chain fatty acid transporter (NCBI)
no
0.68
4
Rru
_A1726
Transcription-repair coupling factor (NCBI)
no
0.68
5
Rru
_A1395
Nitrogenase iron protein (NCBI)
no
0.67
6
Rru
_A2777
Protein of unknown function DUF6, transmembrane (NCBI)
no
0.67
7
Rru
_A3327
hypothetical protein (NCBI)
no
0.67
8
Rru
_A2385
Substrate-binding region of ABC-type glycine betaine transport system (NCBI)
no
0.67
9
Rru
_A2380
Major facilitator superfamily MFS_1 (NCBI)
no
0.67
10
Rru
_A0740
Protein of unknown function DUF1178 (NCBI)
no
0.66
11
Rru
_A2832
hypothetical protein (NCBI)
no
0.66
12
Rru
_A3334
Putative ammonia monooxygenase (NCBI)
no
0.66
13
Rru
_A0737
Phosphoribosyltransferase (NCBI)
no
0.65
14
Rru
_A2591
hypothetical protein (NCBI)
no
0.65
15
Rru
_A0638
hypothetical protein (NCBI)
no
0.64
16
Rru
_A3575
Acetate--CoA ligase (NCBI)
no
0.63
17
Rru
_A2833
hypothetical protein (NCBI)
no
0.62
18
Rru
_A0400
hypothetical protein (NCBI)
no
0.62
19
Rru
_A0047
ABC transporter component (NCBI)
no
0.61
20
Rru
_A1216
hypothetical protein (NCBI)
no
0.61
Or look for
negative cofitness