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  • Top cofit genes for Rru_A2548 from Rhodospirillum rubrum S1H

    hypothetical protein (NCBI)
    SEED: COG0741: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1302 Formiminoglutamate deiminase (NCBI) no 0.74
    2 Rru_A0892 stress protein (NCBI) no 0.66
    3 Rru_A0937 Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like (NCBI) no 0.66
    4 Rru_A2153 TonB-like (NCBI) no 0.65
    5 Rru_A2919 hypothetical protein (NCBI) no 0.65
    6 Rru_A0322 Peptidase M52, hydrogen uptake protein (NCBI) no 0.64
    7 Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins (NCBI) no 0.64
    8 Rru_A0232 hypothetical protein (NCBI) no 0.63
    9 Rru_A3354 Protein of unknown function DUF45 (NCBI) no 0.62
    10 Rru_A1154 Protein of unknown function DUF48 (NCBI) no 0.62
    11 Rru_A3046 Radical SAM (NCBI) no 0.61
    12 Rru_A0576 chemotaxis sensory transducer (NCBI) no 0.60
    13 Rru_A1425 NADH dehydrogenase (ubiquinone) (NCBI) no 0.60
    14 Rru_A1018 extracellular solute-binding protein, family 1 (NCBI) no 0.60
    15 Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) no 0.60
    16 Rru_A2128 Transcriptional Regulator, LytR/AlgR family (NCBI) no 0.59
    17 Rru_A1777 Beta-N-acetylhexosaminidase (NCBI) no 0.59
    18 Rru_A2748 ABC transporter component (NCBI) no 0.58
    19 Rru_A2728 NnrU (NCBI) no 0.58
    20 Rru_A1735 hypothetical protein (NCBI) no 0.58

    Or look for negative cofitness