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  • Top cofit genes for Rru_A2511 from Rhodospirillum rubrum S1H

    Putative diguanylate cyclase (GGDEF domain) (NCBI)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2197 3,4-Dihydroxy-2-butanone 4-phosphate synthase (NCBI) no 0.69
    2 Rru_A0376 Transcriptional Regulator, LytR/AlgR family (NCBI) no 0.67
    3 Rru_A2099 surface antigen (NCBI) no 0.64
    4 Rru_A2487 BsuBIPstI restriction endonuclease-like (NCBI) no 0.61
    5 Rru_A1525 Nucleoside diphosphate pyrophosphatase (NCBI) no 0.61
    6 Rru_A1381 Short chain fatty acid transporter (NCBI) no 0.61
    7 Rru_A1387 hypothetical protein (NCBI) no 0.60
    8 Rru_A0289 NUDIX hydrolase (NCBI) no 0.60
    9 Rru_A1253 Glutamine synthetase, catalytic region (NCBI) no 0.60
    10 Rru_A1874 hypothetical protein (NCBI) no 0.59
    11 Rru_A1867 Protein of unknown function DUF583 (NCBI) no 0.58
    12 Rru_A0776 Aspartate/tyrosine/aromatic aminotransferase (NCBI) no 0.58
    13 Rru_A0860 RND efflux system, outer membrane lipoprotein, NodT (NCBI) no 0.57
    14 Rru_A1439 Putative FecR (NCBI) no 0.56
    15 Rru_A0917 Methionine adenosyltransferase (NCBI) no 0.56
    16 Rru_A3334 Putative ammonia monooxygenase (NCBI) no 0.56
    17 Rru_A2111 hypothetical protein (NCBI) no 0.56
    18 Rru_A3417 Extracellular ligand-binding receptor (NCBI) no 0.55
    19 Rru_A2997 Phosphate acetyltransferase (NCBI) no 0.55
    20 Rru_A0721 Anti-Sigm factor, ChrR (NCBI) no 0.54

    Or look for negative cofitness