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  • Top cofit genes for Rru_A2405 from Rhodospirillum rubrum S1H

    transketolase (NCBI)
    SEED: Transketolase (EC 2.2.1.1)
    KEGG: transketolase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1121 Pyruvate carboxylase (NCBI) no 0.78
    2 Rru_A1548 Malonyl-CoA decarboxylase (NCBI) no 0.77
    3 Rru_A2413 Poly(R)-hydroxyalkanoic acid synthase, class I (NCBI) 0.68 0.75
    4 Rru_A1140 Elongation factor G (NCBI) no 0.69
    5 Rru_A2041 Aminotransferase class-III (NCBI) no 0.63
    6 Rru_A0314 NADH dehydrogenase (quinone) (NCBI) 0.32 0.61
    7 Rru_A1046 AMP-dependent synthetase and ligase (NCBI) no 0.58
    8 Rru_A0190 TonB-dependent receptor (NCBI) no 0.55
    9 Rru_A3093 Membrane protein involved in the export of O-antigen and teichoic acid-like (NCBI) no 0.55
    10 Rru_A3360 Electron transport protein SCO1/SenC (NCBI) no 0.54
    11 Rru_A1604 Alpha amylase, catalytic region (NCBI) no 0.53
    12 Rru_A0511 DEAD/DEAH box helicase (NCBI) no 0.53
    13 Rru_A0903 Pyruvate formate-lyase (NCBI) no 0.53
    14 Rru_A3753 hypothetical protein (NCBI) no 0.53
    15 Rru_A0720 Transcriptional Regulator, MarR family (NCBI) no 0.52
    16 Rru_A0273 Acetoacetyl-CoA reductase (NCBI) no 0.52
    17 Rru_A0935 NAD-dependent epimerase/dehydratase (NCBI) no 0.52
    18 Rru_A3316 Phage integrase (NCBI) no 0.50
    19 Rru_A1200 Citrate lyase (NCBI) 0.35 0.50
    20 Rru_A2730 hypothetical protein (NCBI) no 0.50

    Or look for negative cofitness