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Protein
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Top cofit genes for Rru_A2194 from
Rhodospirillum rubrum S1H
MaoC-like dehydratase (NCBI)
SEED: Acyl dehydratase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A0280
Queuine tRNA-ribosyltransferase (NCBI)
no
0.78
2
Rru
_A2085
Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI)
no
0.71
3
Rru
_A3544
Phosphate uptake regulator, PhoU (NCBI)
no
0.68
4
Rru
_A2154
Biopolymer transport protein ExbD/TolR (NCBI)
no
0.68
5
Rru
_A0915
hypothetical protein (NCBI)
no
0.67
6
Rru
_A0515
HAD-superfamily subfamily IIA hydrolase (NCBI)
no
0.67
7
Rru
_A2707
Alpha/beta hydrolase fold (NCBI)
no
0.67
8
Rru
_A3621
Methylated-DNA-(protein)-cysteine S-methyltransferase (NCBI)
0.40
0.66
9
Rru
_A2870
integral membrane protein TerC (NCBI)
no
0.65
10
Rru
_A1066
ABC transporter component (NCBI)
no
0.64
11
Rru
_A0137
TRAP transporter solute receptor, TAXI family (NCBI)
no
0.64
12
Rru
_A2523
Predicted transcriptional regulator (NCBI)
no
0.63
13
Rru
_A2581
hypothetical protein (NCBI)
no
0.62
14
Rru
_A2869
Exopolysaccharide synthesis, ExoD (NCBI)
no
0.62
15
Rru
_A3448
Uncharacterized P-loop ATPase protein UPF0042 (NCBI)
no
0.62
16
Rru
_A2163
conserved hypothetical protein RP631 (NCBI)
no
0.62
17
Rru
_A0207
Cobalt chelatase, CobT subunit (NCBI)
no
0.62
18
Rru
_A3082
Predicted transcriptional regulator (NCBI)
0.29
0.62
19
Rru
_A3495
hypothetical protein (NCBI)
no
0.62
20
Rru
_A2001
hypothetical protein (NCBI)
no
0.62
Or look for
negative cofitness